3D structure

PDB id
7ASO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Staphylococcus aureus 70S after 30 minutes incubation at 37C
Experimental method
ELECTRON MICROSCOPY
Resolution
3.11 Å

Loop

Sequence
CUUCGG
Length
6 nucleotides
Bulged bases
7ASO|1|Y|U|1737
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7ASO_064 not in the Motif Atlas
Geometric match to HL_4LFB_009
Geometric discrepancy: 0.1064
The information below is about HL_4LFB_009
Detailed Annotation
UNCG
Broad Annotation
No text annotation
Motif group
HL_34617.5
Basepair signature
cWW-tSW-F
Number of instances in this motif group
57

Unit IDs

7ASO|1|Y|C|1735
7ASO|1|Y|U|1736
7ASO|1|Y|U|1737
7ASO|1|Y|C|1738
7ASO|1|Y|G|1739
7ASO|1|Y|G|1740

Current chains

Chain Y
23S

Nearby chains

Chain X
Small subunit ribosomal RNA; SSU rRNA

Coloring options:


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