HL_7ASO_073

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

CUUACG

Length

6 nucleotides

Bulged bases

7ASO|1|Y|U|2238

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASO_073 not in the Motif Atlas

Homologous match to HL_4WF9_048

Geometric discrepancy: 0.4318

The information below is about HL_4WF9_048

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_49922.4

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

7ASO|1|Y|C|2236
7ASO|1|Y|U|2237
7ASO|1|Y|U|2238
7ASO|1|Y|A|2239
7ASO|1|Y|C|2241
7ASO|1|Y|G|2242

Current chains

Chain Y

23S

Nearby chains