HL_7ASO_080
3D structure
- PDB id
- 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- CGCAUGGAAG
- Length
- 10 nucleotides
- Bulged bases
- 7ASO|1|Y|C|2433
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ASO_080 not in the Motif Atlas
- Homologous match to HL_4WF9_055
- Geometric discrepancy: 0.2994
- The information below is about HL_4WF9_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53454.2
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
7ASO|1|Y|C|2431
7ASO|1|Y|G|2432
7ASO|1|Y|C|2433
7ASO|1|Y|A|2434
7ASO|1|Y|U|2435
7ASO|1|Y|G|2436
7ASO|1|Y|G|2437
7ASO|1|Y|A|2438
7ASO|1|Y|A|2439
7ASO|1|Y|G|2440
Current chains
- Chain Y
- 23S
Nearby chains
- Chain O
- 50S ribosomal protein L15
Coloring options: