HL_7ASO_088

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

AAAGAUGAU

Length

9 nucleotides

Bulged bases

7ASO|1|Y|A|2840

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASO_088 not in the Motif Atlas

Homologous match to HL_4WF9_064

Geometric discrepancy: 0.14

The information below is about HL_4WF9_064

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37889.1

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

12

Unit IDs

7ASO|1|Y|A|2839
7ASO|1|Y|A|2840
7ASO|1|Y|A|2841
7ASO|1|Y|G|2842
7ASO|1|Y|A|2843
7ASO|1|Y|U|2844
7ASO|1|Y|G|2845
7ASO|1|Y|A|2846
7ASO|1|Y|U|2847

Current chains

Chain Y

23S

Nearby chains

Chain Q

50S ribosomal protein L17

Chain e

50S ribosomal protein L3