3D structure

PDB id
7ASO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Staphylococcus aureus 70S after 30 minutes incubation at 37C
Experimental method
ELECTRON MICROSCOPY
Resolution
3.11 Å

Loop

Sequence
CAUUAGCUAGUUGGUAAGGUAACGGCUUACCAAGGCAACGAUG
Length
43 nucleotides
Bulged bases
7ASO|1|X|U|252, 7ASO|1|X|G|259, 7ASO|1|X|C|288
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ASO|1|X|C|250
7ASO|1|X|A|251
7ASO|1|X|U|252
7ASO|1|X|U|253
7ASO|1|X|A|254
7ASO|1|X|G|255
7ASO|1|X|C|256
7ASO|1|X|U|257
7ASO|1|X|A|258
7ASO|1|X|G|259
7ASO|1|X|U|260
7ASO|1|X|U|261
7ASO|1|X|G|262
7ASO|1|X|G|263
7ASO|1|X|U|264
7ASO|1|X|A|265
7ASO|1|X|A|266
7ASO|1|X|G|267
7ASO|1|X|G|268
7ASO|1|X|U|269
7ASO|1|X|A|270
7ASO|1|X|A|271
7ASO|1|X|C|272
7ASO|1|X|G|273
7ASO|1|X|G|274
7ASO|1|X|C|275
7ASO|1|X|U|276
7ASO|1|X|U|277
7ASO|1|X|A|278
7ASO|1|X|C|279
7ASO|1|X|C|280
7ASO|1|X|A|281
7ASO|1|X|A|282
7ASO|1|X|G|283
7ASO|1|X|G|284
7ASO|1|X|C|285
7ASO|1|X|A|286
7ASO|1|X|A|287
7ASO|1|X|C|288
7ASO|1|X|G|289
7ASO|1|X|A|290
7ASO|1|X|U|291
7ASO|1|X|G|292

Current chains

Chain X
16S

Nearby chains

Chain 3
30S ribosomal protein S12
Chain 8
30S ribosomal protein S17
Chain A
30S ribosomal protein S20
Chain Y
Large subunit ribosomal RNA; LSU rRNA

Coloring options:

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