HL_7ASP_014

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CUAACG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASP_014 not in the Motif Atlas

Homologous match to HL_5J7L_019

Geometric discrepancy: 0.2516

The information below is about HL_5J7L_019

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

7ASP|1|X|C|872
7ASP|1|X|U|873
7ASP|1|X|A|874
7ASP|1|X|A|875
7ASP|1|X|C|876
7ASP|1|X|G|877

Current chains

Chain X

16S rRNA

Nearby chains

Chain m

30S ribosomal protein S5

Chain o

30S ribosomal protein S8