HL_7ASP_024
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- GACGAUAU
- Length
- 8 nucleotides
- Bulged bases
- 7ASP|1|Y|U|72
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ASP_024 not in the Motif Atlas
- Geometric match to HL_4WF9_001
- Geometric discrepancy: 0.2956
- The information below is about HL_4WF9_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86769.4
- Basepair signature
- cWW-cWW-cSH-F
- Number of instances in this motif group
- 5
Unit IDs
7ASP|1|Y|G|67
7ASP|1|Y|A|68
7ASP|1|Y|C|69
7ASP|1|Y|G|70
7ASP|1|Y|A|71
7ASP|1|Y|U|72
7ASP|1|Y|A|73
7ASP|1|Y|U|74
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain R
- 50S ribosomal protein L23
- Chain W
- 50S ribosomal protein L29
Coloring options: