HL_7ASP_031

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

GUUGC

Length

5 nucleotides

Bulged bases

7ASP|1|Y|U|286

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASP_031 not in the Motif Atlas

Geometric match to HL_5TBW_044

Geometric discrepancy: 0.364

The information below is about HL_5TBW_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.1

Basepair signature

cWW

Number of instances in this motif group

4

Unit IDs

7ASP|1|Y|G|283
7ASP|1|Y|U|285
7ASP|1|Y|U|286
7ASP|1|Y|G|287
7ASP|1|Y|C|288

Current chains

Chain Y

23S rRNA

Nearby chains