HL_7ASP_034
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- AGCACGUGAAAUU
- Length
- 13 nucleotides
- Bulged bases
- 7ASP|1|Y|G|432, 7ASP|1|Y|A|435
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ASP_034 not in the Motif Atlas
- Homologous match to HL_4WF9_013
- Geometric discrepancy: 0.3237
- The information below is about HL_4WF9_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69139.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7ASP|1|Y|A|427
7ASP|1|Y|G|428
7ASP|1|Y|C|429
7ASP|1|Y|A|430
7ASP|1|Y|C|431
7ASP|1|Y|G|432
7ASP|1|Y|U|433
7ASP|1|Y|G|434
7ASP|1|Y|A|435
7ASP|1|Y|A|436
7ASP|1|Y|A|437
7ASP|1|Y|U|438
7ASP|1|Y|U|439
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain V
- 50S ribosomal protein L28
Coloring options: