HL_7ASP_070

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CUUAUCG

Length

7 nucleotides

Bulged bases

7ASP|1|Y|U|2240

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASP_070 not in the Motif Atlas

Geometric match to HL_8C3A_039

Geometric discrepancy: 0.3152

The information below is about HL_8C3A_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7ASP|1|Y|C|2236
7ASP|1|Y|U|2237
7ASP|1|Y|U|2238
7ASP|1|Y|A|2239
7ASP|1|Y|U|2240
7ASP|1|Y|C|2241
7ASP|1|Y|G|2242

Current chains

Chain Y

23S rRNA

Nearby chains