HL_7ASP_073
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- AAUGGUUGAAAUCAUU*U
- Length
- 17 nucleotides
- Bulged bases
- 7ASP|1|Y|U|2329, 7ASP|1|Y|G|2330, 7ASP|1|Y|U|2332, 7ASP|1|Y|A|2336, 7ASP|1|Y|A|2337
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ASP_073 not in the Motif Atlas
- Geometric match to HL_8C3A_039
- Geometric discrepancy: 0.3595
- The information below is about HL_8C3A_039
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
7ASP|1|Y|A|2327
7ASP|1|Y|A|2328
7ASP|1|Y|U|2329
7ASP|1|Y|G|2330
7ASP|1|Y|G|2331
7ASP|1|Y|U|2332
7ASP|1|Y|U|2333
7ASP|1|Y|G|2334
7ASP|1|Y|A|2336
7ASP|1|Y|A|2337
7ASP|1|Y|A|2338
7ASP|1|Y|U|2339
7ASP|1|Y|C|2340
7ASP|1|Y|A|2341
7ASP|1|Y|U|2342
7ASP|1|Y|U|2343
*
7ASP|1|Y|U|2343
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain F
- 50S ribosomal protein L5
- Chain M
- 50S ribosomal protein L18
- Chain d
- 30S ribosomal protein S13
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