HL_7ASP_084
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 7ASP|1|Y|A|2776, 7ASP|1|Y|A|2777, 7ASP|1|Y|G|2778
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ASP_084 not in the Motif Atlas
- Homologous match to HL_7A0S_065
- Geometric discrepancy: 0.3626
- The information below is about HL_7A0S_065
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53269.1
- Basepair signature
- cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 11
Unit IDs
7ASP|1|Y|C|2772
7ASP|1|Y|U|2773
7ASP|1|Y|G|2774
7ASP|1|Y|A|2775
7ASP|1|Y|A|2776
7ASP|1|Y|A|2777
7ASP|1|Y|G|2778
7ASP|1|Y|C|2779
7ASP|1|Y|A|2780
7ASP|1|Y|U|2781
7ASP|1|Y|C|2782
7ASP|1|Y|U|2783
7ASP|1|Y|A|2784
7ASP|1|Y|A|2785
7ASP|1|Y|G|2786
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
- Chain H
- 50S ribosomal protein L13
Coloring options: