HL_7ASP_091

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

AGAAAUU

Length

7 nucleotides

Bulged bases

7ASP|1|Y|A|826, 7ASP|1|Y|U|829

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASP_091 not in the Motif Atlas

Homologous match to HL_4WF9_024

Geometric discrepancy: 0.1778

The information below is about HL_4WF9_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_92935.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

5

Unit IDs

7ASP|1|Y|A|824
7ASP|1|Y|G|825
7ASP|1|Y|A|826
7ASP|1|Y|A|827
7ASP|1|Y|A|828
7ASP|1|Y|U|829
7ASP|1|Y|U|830

Current chains

Chain Y

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2