HL_7AZO_005

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

7AZO|1|16SA|U|854, 7AZO|1|16SA|U|856

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZO_005 not in the Motif Atlas

Homologous match to HL_4LFB_005

Geometric discrepancy: 0.4081

The information below is about HL_4LFB_005

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

7AZO|1|16SA|C|853
7AZO|1|16SA|U|854
7AZO|1|16SA|U|855
7AZO|1|16SA|U|856
7AZO|1|16SA|G|857

Current chains

Chain 16SA

16S rRNA

Nearby chains