HL_7AZO_026

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GUUCGGC

Length

7 nucleotides

Bulged bases

7AZO|1|16SA|U|1764, 7AZO|1|16SA|G|1767

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZO_026 not in the Motif Atlas

Homologous match to HL_6CZR_097

Geometric discrepancy: 0.3178

The information below is about HL_6CZR_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AZO|1|16SA|G|1762
7AZO|1|16SA|U|1763
7AZO|1|16SA|U|1764
7AZO|1|16SA|C|1765
7AZO|1|16SA|G|1766
7AZO|1|16SA|G|1767
7AZO|1|16SA|C|1768

Current chains

Chain 16SA

16S rRNA

Nearby chains

Chain S9A

30S ribosomal protein S9