HL_7AZO_027

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZO_027 not in the Motif Atlas

Homologous match to HL_4LFB_027

Geometric discrepancy: 0.1518

The information below is about HL_4LFB_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

7AZO|1|16SA|C|1793
7AZO|1|16SA|G|1794
7AZO|1|16SA|A|1795
7AZO|1|16SA|A|1796
7AZO|1|16SA|A|1797
7AZO|1|16SA|G|1798

Current chains

Chain 16SA

16S rRNA

Nearby chains

Chain S2A

30S ribosomal protein S2