HL_7AZO_031

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

7AZO|1|16SA|A|2077, 7AZO|1|16SA|G|2079

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZO_031 not in the Motif Atlas

Homologous match to HL_6CZR_102

Geometric discrepancy: 0.5585

The information below is about HL_6CZR_102

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52463.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

1

Unit IDs

7AZO|1|16SA|C|2075
7AZO|1|16SA|U|2076
7AZO|1|16SA|A|2077
7AZO|1|16SA|C|2078
7AZO|1|16SA|G|2079
7AZO|1|16SA|G|2080

Current chains

Chain 16SA

16S rRNA

Nearby chains

Chain S20A

30S ribosomal protein S20