HL_7AZO_040
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CACUGAGACACGGG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZO_040 not in the Motif Atlas
- Homologous match to HL_4LFB_008
- Geometric discrepancy: 0.0992
- The information below is about HL_4LFB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39665.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7AZO|1|16SB|C|961
7AZO|1|16SB|A|962
7AZO|1|16SB|C|963
7AZO|1|16SB|U|964
7AZO|1|16SB|G|965
7AZO|1|16SB|A|966
7AZO|1|16SB|G|967
7AZO|1|16SB|A|968
7AZO|1|16SB|C|969
7AZO|1|16SB|A|970
7AZO|1|16SB|C|971
7AZO|1|16SB|G|972
7AZO|1|16SB|G|973
7AZO|1|16SB|G|974
Current chains
- Chain 16SB
- 16S rRNA
Nearby chains
- Chain S16B
- 30S ribosomal protein S16
- Chain S20B
- 30S ribosomal protein S20
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