HL_7AZO_063

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

7AZO|1|16SB|U|2076, 7AZO|1|16SB|A|2077, 7AZO|1|16SB|G|2079

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZO_063 not in the Motif Atlas

Geometric match to HL_4TUW_002

Geometric discrepancy: 0.253

The information below is about HL_4TUW_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_12626.1

Basepair signature

cWW-F

Number of instances in this motif group

12

Unit IDs

7AZO|1|16SB|C|2075
7AZO|1|16SB|U|2076
7AZO|1|16SB|A|2077
7AZO|1|16SB|C|2078
7AZO|1|16SB|G|2079
7AZO|1|16SB|G|2080

Current chains

Chain 16SB

16S rRNA

Nearby chains

Chain S20B

30S ribosomal protein S20