HL_7AZO_075

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CAGAG

Length

5 nucleotides

Bulged bases

7AZO|1|23SA|G|346, 7AZO|1|23SA|A|347

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZO_075 not in the Motif Atlas

Geometric match to HL_7RQB_011

Geometric discrepancy: 0.0736

The information below is about HL_7RQB_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70546.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

7AZO|1|23SA|C|344
7AZO|1|23SA|A|345
7AZO|1|23SA|G|346
7AZO|1|23SA|A|347
7AZO|1|23SA|G|348

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain L24A

50S ribosomal protein L24

Chain L4A

50S ribosomal protein L4