HL_7AZO_090

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

7AZO|1|23SA|U|876, 7AZO|1|23SA|G|879

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZO_090 not in the Motif Atlas

Geometric match to HL_5J7L_157

Geometric discrepancy: 0.0643

The information below is about HL_5J7L_157

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55195.3

Basepair signature

cWW-F

Number of instances in this motif group

6

Unit IDs

7AZO|1|23SA|U|875
7AZO|1|23SA|U|876
7AZO|1|23SA|U|877
7AZO|1|23SA|A|878
7AZO|1|23SA|G|879
7AZO|1|23SA|G|880

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain L15A

50S ribosomal protein L15