HL_7AZO_096

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GGGAUGACC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZO_096 not in the Motif Atlas

Geometric match to HL_5J7L_018

Geometric discrepancy: 0.3981

The information below is about HL_5J7L_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37344.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

7AZO|1|23SA|G|1219
7AZO|1|23SA|G|1220
7AZO|1|23SA|G|1221
7AZO|1|23SA|A|1222
7AZO|1|23SA|U|1223
7AZO|1|23SA|G|1224
7AZO|1|23SA|A|1225
7AZO|1|23SA|C|1226
7AZO|1|23SA|C|1227

Current chains

Chain 23SA

23S rRNA

Nearby chains