HL_7AZO_110

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGCAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZO_110 not in the Motif Atlas

Geometric match to HL_7RQB_044

Geometric discrepancy: 0.0735

The information below is about HL_7RQB_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_76539.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

7AZO|1|23SA|C|1786
7AZO|1|23SA|G|1787
7AZO|1|23SA|C|1788
7AZO|1|23SA|A|1789
7AZO|1|23SA|G|1790

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain L19A

50S ribosomal protein L19