HL_7AZO_155

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZO_155 not in the Motif Atlas

Geometric match to HL_4WFL_003

Geometric discrepancy: 0.0892

The information below is about HL_4WFL_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7AZO|1|23SB|G|656
7AZO|1|23SB|G|657
7AZO|1|23SB|A|658
7AZO|1|23SB|A|659
7AZO|1|23SB|A|660
7AZO|1|23SB|C|661

Current chains

Chain 23SB

23S rRNA

Nearby chains

Chain L15B

50S ribosomal protein L15

Chain L35B

50S ribosomal protein L35