HL_7AZO_182
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CG(PSU)AAC(5MU)A(PSU)AA(OMC)G
- Length
- 13 nucleotides
- Bulged bases
- 7AZO|1|23SB|A|1938, 7AZO|1|23SB|C|1939, 7AZO|1|23SB|A|1941
- QA status
- Modified nucleotides: PSU, 5MU, OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZO_182 not in the Motif Atlas
- Homologous match to HL_8VTW_047
- Geometric discrepancy: 0.0985
- The information below is about HL_8VTW_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7AZO|1|23SB|C|1934
7AZO|1|23SB|G|1935
7AZO|1|23SB|PSU|1936
7AZO|1|23SB|A|1937
7AZO|1|23SB|A|1938
7AZO|1|23SB|C|1939
7AZO|1|23SB|5MU|1940
7AZO|1|23SB|A|1941
7AZO|1|23SB|PSU|1942
7AZO|1|23SB|A|1943
7AZO|1|23SB|A|1944
7AZO|1|23SB|OMC|1945
7AZO|1|23SB|G|1946
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain 16SB
- Small subunit ribosomal RNA; SSU rRNA
- Chain ASIB
- Transfer RNA; tRNA
- Chain MRNB
- RNA (30-MER)
- Chain PSIB
- Transfer RNA; tRNA
Coloring options: