HL_7AZO_185

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CCUCCGGG

Length

8 nucleotides

Bulged bases

7AZO|1|23SB|C|2170

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AZO|1|23SB|C|2167
7AZO|1|23SB|C|2168
7AZO|1|23SB|U|2169
7AZO|1|23SB|C|2170
7AZO|1|23SB|C|2171
7AZO|1|23SB|G|2172
7AZO|1|23SB|G|2173
7AZO|1|23SB|G|2174

Current chains

Chain 23SB

23S rRNA

Nearby chains

Chain 16SA

Small subunit ribosomal RNA; SSU rRNA

Chain ESIB

Transfer RNA; tRNA

Chain S11B

30S ribosomal protein S11