HL_7AZO_204
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CAUUCCG
- Length
- 7 nucleotides
- Bulged bases
- 7AZO|1|5SA|U|43
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZO_204 not in the Motif Atlas
- Geometric match to HL_7RQB_070
- Geometric discrepancy: 0.1052
- The information below is about HL_7RQB_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87939.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
7AZO|1|5SA|C|40
7AZO|1|5SA|A|41
7AZO|1|5SA|U|42
7AZO|1|5SA|U|43
7AZO|1|5SA|C|44
7AZO|1|5SA|C|45
7AZO|1|5SA|G|46
Current chains
- Chain 5SA
- 5S rRNA
Nearby chains
- Chain 23SA
- Large subunit ribosomal RNA; LSU rRNA
- Chain L18A
- 50S ribosomal protein L18
- Chain L31A
- 50S ribosomal protein L31
- Chain L5A
- 50S ribosomal protein L5
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