HL_7AZO_221
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GA(PSU)UGAA(MIA)A(PSU)C
- Length
- 11 nucleotides
- Bulged bases
- 7AZO|1|PSIA|U|33, 7AZO|1|PSIA|A|38
- QA status
- Modified nucleotides: PSU, MIA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZO_221 not in the Motif Atlas
- Geometric match to HL_1WZ2_007
- Geometric discrepancy: 0.149
- The information below is about HL_1WZ2_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
7AZO|1|PSIA|G|30
7AZO|1|PSIA|A|31
7AZO|1|PSIA|PSU|32
7AZO|1|PSIA|U|33
7AZO|1|PSIA|G|34
7AZO|1|PSIA|A|35
7AZO|1|PSIA|A|36
7AZO|1|PSIA|MIA|37
7AZO|1|PSIA|A|38
7AZO|1|PSIA|PSU|39
7AZO|1|PSIA|C|40
Current chains
- Chain PSIA
- Phe-tRNA
Nearby chains
- Chain 16SA
- Small subunit ribosomal RNA; SSU rRNA
- Chain ESIA
- Transfer RNA; tRNA
- Chain MRNA
- RNA (30-MER)
- Chain S13A
- 30S ribosomal protein S13
- Chain S9A
- 30S ribosomal protein S9
Coloring options: