HL_7AZO_227

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GA(PSU)UGAA(MIA)A(PSU)C

Length

11 nucleotides

Bulged bases

7AZO|1|TRNA|A|38

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZO_227 not in the Motif Atlas

Homologous match to HL_5J8B_106

Geometric discrepancy: 0.2683

The information below is about HL_5J8B_106

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AZO|1|TRNA|G|30
7AZO|1|TRNA|A|31
7AZO|1|TRNA|PSU|32
7AZO|1|TRNA|U|33
7AZO|1|TRNA|G|34
7AZO|1|TRNA|A|35
7AZO|1|TRNA|A|36
7AZO|1|TRNA|MIA|37
7AZO|1|TRNA|A|38
7AZO|1|TRNA|PSU|39
7AZO|1|TRNA|C|40

Current chains

Chain TRNA

Phe-tRNA

Nearby chains

Chain L18A

50S ribosomal protein L18