HL_7AZS_002

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GUUUUAC

Length

7 nucleotides

Bulged bases

7AZS|1|16SA|U|726, 7AZS|1|16SA|U|727, 7AZS|1|16SA|U|728

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZS_002 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.3008

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7AZS|1|16SA|G|724
7AZS|1|16SA|U|725
7AZS|1|16SA|U|726
7AZS|1|16SA|U|727
7AZS|1|16SA|U|728
7AZS|1|16SA|A|729
7AZS|1|16SA|C|730

Current chains

Chain 16SA

16S rRNA

Nearby chains