HL_7AZS_050

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GUCUC

Length

5 nucleotides

Bulged bases

7AZS|1|16SB|U|1470

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZS_050 not in the Motif Atlas

Geometric match to HL_8CRE_021

Geometric discrepancy: 0.289

The information below is about HL_8CRE_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70782.2

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7AZS|1|16SB|G|1467
7AZS|1|16SB|U|1468
7AZS|1|16SB|C|1469
7AZS|1|16SB|U|1470
7AZS|1|16SB|C|1471

Current chains

Chain 16SB

16S rRNA

Nearby chains

Chain S2B

30S ribosomal protein S2