HL_7AZS_068

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGGAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZS_068 not in the Motif Atlas

Geometric match to HL_7RQB_004

Geometric discrepancy: 0.2119

The information below is about HL_7RQB_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79921.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

15

Unit IDs

7AZS|1|23SA|G|136
7AZS|1|23SA|G|137
7AZS|1|23SA|G|138
7AZS|1|23SA|A|139
7AZS|1|23SA|A|140
7AZS|1|23SA|C|141

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain L23A

50S ribosomal protein L23

Chain L29A

50S ribosomal protein L29