HL_7AZS_074

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UUGGGAAG

Length

8 nucleotides

Bulged bases

7AZS|1|23SA|A|336

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZS_074 not in the Motif Atlas

Geometric match to HL_7RQB_010

Geometric discrepancy: 0.0628

The information below is about HL_7RQB_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41998.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

69

Unit IDs

7AZS|1|23SA|U|330
7AZS|1|23SA|U|331
7AZS|1|23SA|G|332
7AZS|1|23SA|G|333
7AZS|1|23SA|G|334
7AZS|1|23SA|A|335
7AZS|1|23SA|A|336
7AZS|1|23SA|G|337

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain L24A

50S ribosomal protein L24