HL_7AZS_245
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CUCAGUCGGUAGAG
- Length
- 14 nucleotides
- Bulged bases
- 7AZS|1|ESIB|C|13, 7AZS|1|ESIB|U|16, 7AZS|1|ESIB|C|17, 7AZS|1|ESIB|G|18, 7AZS|1|ESIB|G|19, 7AZS|1|ESIB|U|20, 7AZS|1|ESIB|A|21
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZS_245 not in the Motif Atlas
- Homologous match to HL_7KJT_001
- Geometric discrepancy: 0.4635
- The information below is about HL_7KJT_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68572.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
7AZS|1|ESIB|C|11
7AZS|1|ESIB|U|12
7AZS|1|ESIB|C|13
7AZS|1|ESIB|A|14
7AZS|1|ESIB|G|15
7AZS|1|ESIB|U|16
7AZS|1|ESIB|C|17
7AZS|1|ESIB|G|18
7AZS|1|ESIB|G|19
7AZS|1|ESIB|U|20
7AZS|1|ESIB|A|21
7AZS|1|ESIB|G|22
7AZS|1|ESIB|A|23
7AZS|1|ESIB|G|24
Current chains
- Chain ESIB
- Phe-tRNA
Nearby chains
- Chain 23SB
- Large subunit ribosomal RNA; LSU rRNA
- Chain S11B
- 30S ribosomal protein S11
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