HL_7AZY_021

3D structure

PDB id

7AZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Context-specific inhibition of eukaryotic translation by macrolide antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

2.877 Å

Loop

Sequence

GCGAAAGAC

Length

9 nucleotides

Bulged bases

7AZY|1|E|A|913, 7AZY|1|E|G|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZY_021 not in the Motif Atlas

Homologous match to HL_5TBW_021

Geometric discrepancy: 0.0594

The information below is about HL_5TBW_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56443.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7AZY|1|E|G|910
7AZY|1|E|C|911
7AZY|1|E|G|912
7AZY|1|E|A|913
7AZY|1|E|A|914
7AZY|1|E|A|915
7AZY|1|E|G|916
7AZY|1|E|A|917
7AZY|1|E|C|918

Current chains

Chain E

25S ribosomal RNA

Nearby chains

Chain R

60S ribosomal protein L15-A

Chain g

60S ribosomal protein L37-A

Chain x

60S ribosomal protein L2-A