HL_7AZY_042

3D structure

PDB id

7AZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Context-specific inhibition of eukaryotic translation by macrolide antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

2.877 Å

Loop

Sequence

UGAACAG

Length

7 nucleotides

Bulged bases

7AZY|1|E|C|1866

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZY_042 not in the Motif Atlas

Homologous match to HL_5TBW_042

Geometric discrepancy: 0.0994

The information below is about HL_5TBW_042

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7AZY|1|E|U|1862
7AZY|1|E|G|1863
7AZY|1|E|A|1864
7AZY|1|E|A|1865
7AZY|1|E|C|1866
7AZY|1|E|A|1867
7AZY|1|E|G|1868

Current chains

Chain E

25S ribosomal RNA

Nearby chains

Chain H

60S ribosomal protein L19-A