HL_7AZY_053

3D structure

PDB id

7AZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Context-specific inhibition of eukaryotic translation by macrolide antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

2.877 Å

Loop

Sequence

CAUUCG

Length

6 nucleotides

Bulged bases

7AZY|1|E|U|2571, 7AZY|1|E|C|2572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZY_053 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3661

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7AZY|1|E|C|2568
7AZY|1|E|A|2569
7AZY|1|E|U|2570
7AZY|1|E|U|2571
7AZY|1|E|C|2572
7AZY|1|E|G|2573

Current chains

Chain E

25S ribosomal RNA

Nearby chains

Chain O

60S ribosomal protein L27-A