HL_7AZY_062

3D structure

PDB id

7AZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Context-specific inhibition of eukaryotic translation by macrolide antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

2.877 Å

Loop

Sequence

AGCAGAAU

Length

8 nucleotides

Bulged bases

7AZY|1|E|G|2898

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZY_062 not in the Motif Atlas

Homologous match to HL_5TBW_062

Geometric discrepancy: 0.1005

The information below is about HL_5TBW_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79150.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

7AZY|1|E|A|2897
7AZY|1|E|G|2898
7AZY|1|E|C|2899
7AZY|1|E|A|2900
7AZY|1|E|G|2901
7AZY|1|E|A|2902
7AZY|1|E|A|2903
7AZY|1|E|U|2904

Current chains

Chain E

25S ribosomal RNA

Nearby chains

Chain P

Ubiquitin-60S ribosomal protein L40

Chain e

60S ribosomal protein L9-A