HL_7AZY_074
3D structure
- PDB id
- 7AZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Context-specific inhibition of eukaryotic translation by macrolide antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.877 Å
Loop
- Sequence
- CAGCGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZY_074 not in the Motif Atlas
- Geometric match to HL_7A0S_001
- Geometric discrepancy: 0.2602
- The information below is about HL_7A0S_001
- Detailed Annotation
- Pseudoknot with intercalation
- Broad Annotation
- No text annotation
- Motif group
- HL_93438.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
7AZY|1|G|C|47
7AZY|1|G|A|48
7AZY|1|G|G|49
7AZY|1|G|C|50
7AZY|1|G|G|51
7AZY|1|G|A|52
7AZY|1|G|A|53
7AZY|1|G|A|54
7AZY|1|G|U|55
7AZY|1|G|G|56
Current chains
- Chain G
- 5.8S ribosomal RNA
Nearby chains
- Chain D
- 60S ribosomal protein L35-A
- Chain E
- Large subunit ribosomal RNA; LSU rRNA
- Chain I
- 60S ribosomal protein L25
- Chain M
- 60S ribosomal protein L39
- Chain g
- 60S ribosomal protein L37-A
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