HL_7B5K_078
3D structure
- PDB id
- 7B5K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGCAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7B5K_078 not in the Motif Atlas
- Homologous match to HL_5J7L_004
- Geometric discrepancy: 0.1641
- The information below is about HL_5J7L_004
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.7
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 349
Unit IDs
7B5K|1|a|C|186
7B5K|1|a|G|187
7B5K|1|a|C|188
7B5K|1|a|A|189
7B5K|1|a|A|190
7B5K|1|a|G|191
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain t
- 30S ribosomal protein S20
Coloring options: