HL_7B7D_091

3D structure

PDB id

7B7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AAUUCAUUUU

Length

10 nucleotides

Bulged bases

7B7D|1|LA|C|2539

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7B7D_091 not in the Motif Atlas

Geometric match to HL_8C3A_006

Geometric discrepancy: 0.1887

The information below is about HL_8C3A_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7B7D|1|LA|A|2535
7B7D|1|LA|A|2536
7B7D|1|LA|U|2537
7B7D|1|LA|U|2538
7B7D|1|LA|C|2539
7B7D|1|LA|A|2540
7B7D|1|LA|U|2541
7B7D|1|LA|U|2542
7B7D|1|LA|U|2543
7B7D|1|LA|U|2544

Current chains

Chain LA

25S rRNA

Nearby chains

Chain LJ

60S ribosomal protein L8-A