HL_7B7D_119
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CAGUGGAAG
- Length
- 9 nucleotides
- Bulged bases
- 7B7D|1|Sn|U|16, 7B7D|1|Sn|G|18, 7B7D|1|Sn|G|19, 7B7D|1|Sn|A|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7B7D_119 not in the Motif Atlas
- Homologous match to HL_6PMO_003
- Geometric discrepancy: 0.145
- The information below is about HL_6PMO_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7B7D|1|Sn|C|13
7B7D|1|Sn|A|14
7B7D|1|Sn|G|15
7B7D|1|Sn|U|16
7B7D|1|Sn|G|18
7B7D|1|Sn|G|19
7B7D|1|Sn|A|20
7B7D|1|Sn|A|21
7B7D|1|Sn|G|22
Current chains
- Chain Sn
- tRNA
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain LM
- 60S ribosomal protein L11-B
- Chain Lk
- 60S ribosomal protein L42-A
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