HL_7BGE_011

3D structure

PDB id

7BGE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 30S ribosomal subunit in presence of spermidine (head only)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAAACCGCGAGGUCAAG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BGE|1|a|C|1270
7BGE|1|a|G|1271
7BGE|1|a|A|1272
7BGE|1|a|A|1273
7BGE|1|a|A|1274
7BGE|1|a|C|1275
7BGE|1|a|C|1276
7BGE|1|a|G|1277
7BGE|1|a|C|1278
7BGE|1|a|G|1279
7BGE|1|a|A|1280
7BGE|1|a|G|1281
7BGE|1|a|G|1282
7BGE|1|a|U|1283
7BGE|1|a|C|1284
7BGE|1|a|A|1285
7BGE|1|a|A|1286
7BGE|1|a|G|1287

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain m

30S ribosomal protein S13