HL_7BHP_001

3D structure

PDB id

7BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human Ebp1 - 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCCCCGGGGGG

Length

11 nucleotides

Bulged bases

7BHP|1|B|C|18

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BHP|1|B|C|14
7BHP|1|B|C|15
7BHP|1|B|C|16
7BHP|1|B|C|17
7BHP|1|B|C|18
7BHP|1|B|G|300
7BHP|1|B|G|301
7BHP|1|B|G|302
7BHP|1|B|G|303
7BHP|1|B|G|304
7BHP|1|B|G|305

Current chains

Chain B

Poly GC double helix strand modeled for ES27L density next to EBP1 density

Nearby chains

Chain A

Proliferation-associated protein 2G4