HL_7BHP_021

3D structure

PDB id

7BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human Ebp1 - 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGCGCGCUCGCC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BHP|1|L5|G|1403
7BHP|1|L5|G|1404
7BHP|1|L5|C|1405
7BHP|1|L5|G|1406
7BHP|1|L5|C|1407
7BHP|1|L5|G|1408
7BHP|1|L5|C|1409
7BHP|1|L5|U|1410
7BHP|1|L5|C|1411
7BHP|1|L5|G|1412
7BHP|1|L5|C|1413
7BHP|1|L5|C|1414

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain La

60S ribosomal protein L27a

Chain Lb

60S ribosomal protein L29