HL_7BHP_058

3D structure

PDB id

7BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human Ebp1 - 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GAGCCCCGAGGGGCUC

Length

16 nucleotides

Bulged bases

7BHP|1|L5|G|4104

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BHP|1|L5|G|4097
7BHP|1|L5|A|4098
7BHP|1|L5|G|4099
7BHP|1|L5|C|4100
7BHP|1|L5|C|4101
7BHP|1|L5|C|4102
7BHP|1|L5|C|4103
7BHP|1|L5|G|4104
7BHP|1|L5|A|4105
7BHP|1|L5|G|4106
7BHP|1|L5|G|4107
7BHP|1|L5|G|4108
7BHP|1|L5|G|4109
7BHP|1|L5|C|4110
7BHP|1|L5|U|4111
7BHP|1|L5|C|4112

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LG

60S ribosomal protein L7a