HL_7BHP_086

3D structure

PDB id

7BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human Ebp1 - 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUCGUAGACGACCUG

Length

15 nucleotides

Bulged bases

7BHP|1|L5|U|4976

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BHP|1|L5|U|4972
7BHP|1|L5|U|4973
7BHP|1|L5|C|4974
7BHP|1|L5|G|4975
7BHP|1|L5|U|4976
7BHP|1|L5|A|4977
7BHP|1|L5|G|4978
7BHP|1|L5|A|4979
7BHP|1|L5|C|4980
7BHP|1|L5|G|4981
7BHP|1|L5|A|4982
7BHP|1|L5|C|4983
7BHP|1|L5|C|4984
7BHP|1|L5|U|4985
7BHP|1|L5|G|4986

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LP

60S ribosomal protein L17

Chain Ld

60S ribosomal protein L31