HL_7BL2_016

3D structure

PDB id

7BL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-50S-ObgE particle state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCUUAGGC

Length

8 nucleotides

Bulged bases

7BL2|1|A|U|546, 7BL2|1|A|G|549

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BL2_016 not in the Motif Atlas

Homologous match to HL_5J7L_149

Geometric discrepancy: 0.2164

The information below is about HL_5J7L_149

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_09452.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

7BL2|1|A|G|543
7BL2|1|A|C|544
7BL2|1|A|U|545
7BL2|1|A|U|546
7BL2|1|A|A|547
7BL2|1|A|G|548
7BL2|1|A|G|549
7BL2|1|A|C|550

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain J

50S ribosomal protein L13

Chain R

50S ribosomal protein L21