HL_7BL2_032

3D structure

PDB id

7BL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-50S-ObgE particle state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUGAAAAGC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BL2_032 not in the Motif Atlas

Homologous match to HL_7RQB_033

Geometric discrepancy: 0.223

The information below is about HL_7RQB_033

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41998.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

69

Unit IDs

7BL2|1|A|G|1281
7BL2|1|A|U|1282
7BL2|1|A|G|1283
7BL2|1|A|A|1284
7BL2|1|A|A|1285
7BL2|1|A|A|1286
7BL2|1|A|A|1287
7BL2|1|A|G|1288
7BL2|1|A|C|1289

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain N

50S ribosomal protein L17

Chain S

50S ribosomal protein L22