HL_7BL2_060

3D structure

PDB id

7BL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-50S-ObgE particle state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AGUUCAUAU

Length

9 nucleotides

Bulged bases

7BL2|1|A|U|2473

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BL2_060 not in the Motif Atlas

Homologous match to HL_4WF9_056

Geometric discrepancy: 0.3071

The information below is about HL_4WF9_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32735.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7BL2|1|A|A|2471
7BL2|1|A|G|2472
7BL2|1|A|U|2473
7BL2|1|A|U|2474
7BL2|1|A|C|2475
7BL2|1|A|A|2476
7BL2|1|A|U|2477
7BL2|1|A|A|2478
7BL2|1|A|U|2479

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 9P1

GTPase ObgE/CgtA